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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824697.1_cds_XP_016502034.1_15715
CDS Infomation

[gene=LOC107820287] [db_xref=GeneID:107820287] [protein=NADP-dependent malic enzyme-like] [protein_id=XP_016502034.1] [location=complement(join(120484..120572,120660..120788,120935..121025,121100..121174,121276..121353,121445..121534,121622..121720,121957..122010,122105..122152,122562..122660,122735..122818,122917..122988,123105..123200,123279..123344,123463..123568,123652..123803,123923..123997,124094..124214,124873..125024))] [gbkey=CDS]
Sequence

ATGGAGAGCGCGTTGAAGGAGCAGAGGGGAGGAGAATCGGTGCTTGACCTGTCACCGAGA
GCAACACCGGCGGGTGGTGTCGAGGATGTCTACGGTGAGGATTGCGCCACCGAGGACCAG
CTTATCACTCCCTGGACTATCGCCGTTTCTAGTGGCTACAACTTGTTGAGGGACCCACGT
TACAACAAAGGGCTTGCCTTCACTGAGAGAGAAAGAGATGCTCATTACTTGCGAGGCCTT
CTGCCTCCTGTGATTTCCACACAGGAGCTTCAGGAGAAAAAAATTATGCAGTCTCTTCGC
CAGTATGATGTCCCTCTGCACAAATATGTTGCCATGATGGAATTAGAGGAAAGAAATGAA
AGGTTGTTTTACAAGCTTCTTATCGATAATGTAGAAGAGTTACTTCCAATTGTCTACACT
CCAACTGTTGGTGAGGCGTGCCAAAAATATGGAAGCATTTTTAAGCGTCCTCAGGGTCTA
TACATCAGCTTGAAAGAAAAGGGAAGGATCCTTGAGGTATTGAAGAACTGGCCTGAAAGA
TCAATACAGGTTATTGTTGTGACTGATGGAGAAAGAATTTTGGGACTTGGGGACCTCGGC
TGCCAGGGAATGGGGATACCAGTTGGGAAGTTGGCTCTGTATACTGCACTTGGAGGAGTC
AGACCTTCAGCGTGCTTGCCAATAACCATTGACGTTGGGACAAATAATGAGCAGTTACTG
AAAGATGAATTCTACATTGGTCTCAGACAAAAGAGAGCAACTGGGCAGGAATACTATGAC
TTCCTACATGAGTTCATGTCAGCTGTAAAGCAAAATTATGGTGAAAAAATTCTCGTACAG
TTTGAGGATTTTGCAAACCACAACGCTTTTGAGCTGTTGGCTAAATATGGTACCACTCAT
TTGGTCTTCAATGATGATATACAGGGGACAGCTTCTGTGGTGCTTGCAGGGCTTATTGCA
TCCCTTAAGCTACTTGGAGGCTCATTAGCTGATCATACATTCTTGTTCCTCGGAGCAGGA
GAAGCTGGGACTGGTATTGCAGAACTCATAGCACTTGAAATTTCAAAGAAGACAAAATGT
CCCGTGGAGGAGACACGAAAAAAGATCTGGCTTGTGGATTCAAAGGGTCTTATTGTTAGT
GGTCGCAAGGAAACACTTCAATCTTTCAAGAAGCCTTGGGCTCATGAACACGAACCTGTT
AACAATCTGCTAGATGCTGTTAAGACCATTAAGCCAACCGTCTTAATTGGGACATCTGGA
GTTGGAAGAACATTTACAAAGGAAGTTATTGAGGCCATGGCCTCCACAAATGAGAGACCT
CTTATTATGGCTCTCTCAAACCCAACCTCACAAGCTGAATGTACAGCTGAAGAAGCTTAT
ACTTGGAGTGAGGGTCGCGCTGTTTTTGCCAGTGGAAGTCCATTCCCTTCTTTTGAATAC
AATGGCAAACTCAACATTCCTGGCCAGGCAAACAACTGTTACATATTCCCTGGATTTGGT
TTTGGGTTGGTCATGTCTGGTACAATCCGTGTGCATGATGACATGCTTTTAGCAGCTTCG
GAAGCTTTGGCTGCTCAAGTAACTGAGGAACATTTTGCCAAGGGGATGATATACCCTCCT
TTTGCTGATATCAGAAAGATCTCAGCTCACATAGCTGCTAGTGTTGCTACTAAAGCGTAT
GAACTTGGTGTGGCAACACGTCTCCCTCGACCTGCAAATTTGGTGAAGTATGCTGAGAGT
TGCATGTATACTCCTAATTACCGAAGCTACAGGTGA

Peptide Sequence

PEP ID

XP_016502034.1
PEP Infomation

PREDICTED: NADP-dependent malic enzyme-like [Nicotiana tabacum]
Sequence

MESALKEQRGGESVLDLSPRATPAGGVEDVYGEDCATEDQLITPWTIAVSSGYNLLRDPR
YNKGLAFTERERDAHYLRGLLPPVISTQELQEKKIMQSLRQYDVPLHKYVAMMELEERNE
RLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIFKRPQGLYISLKEKGRILEVLKNWPER
SIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVRPSACLPITIDVGTNNEQLL
KDEFYIGLRQKRATGQEYYDFLHEFMSAVKQNYGEKILVQFEDFANHNAFELLAKYGTTH
LVFNDDIQGTASVVLAGLIASLKLLGGSLADHTFLFLGAGEAGTGIAELIALEISKKTKC
PVEETRKKIWLVDSKGLIVSGRKETLQSFKKPWAHEHEPVNNLLDAVKTIKPTVLIGTSG
VGRTFTKEVIEAMASTNERPLIMALSNPTSQAECTAEEAYTWSEGRAVFASGSPFPSFEY
NGKLNIPGQANNCYIFPGFGFGLVMSGTIRVHDDMLLAASEALAAQVTEEHFAKGMIYPP
FADIRKISAHIAASVATKAYELGVATRLPRPANLVKYAESCMYTPNYRSYR

Transcript Sequence

Gene sequence data has not been registered.